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Valhalla Fellow Lindsey Backman explains what the microbiome is and the roles that different members of our microbiomes play in health and disease. She also discusses how her lab studies adaptations that some microbes have evolved to tolerate oxygen-containing environments, and how researchers may be able to use what she learns to create better antibiotics and probiotics.

In order for researchers to understand the biology of living organisms, they must consider what is happening across the size scale. Interactions between molecules drive interactions between cells that affect traits and behaviors. Experiences and decisions made by the organism can lead to changes at the cellular and molecular level. In order to understand the full picture, Whitehead Institute researchers study everything from molecules to cells to whole organisms.

Researchers at Whitehead Institute are employing cutting-edge techniques that combine layers of data — from the function of individual genes to the interactions of all molecules within a living organism — to investigate biological phenomena with unprecedented depth and breadth. Their efforts are yielding a richer understanding of the mechanisms involved in health and disease.

From investigating genome-wide associations in health and disease to probing individual molecular mechanisms, Whitehead Institute researchers are spanning the continuum of scales across size, time, and process to reshape our understanding of biology. Read and watch the stories in this collection to learn more.

In Parkinson’s disease, clumps of sticky proteins trigger inflammation in the brain, leading to neuronal death. Whitehead Institute’s Founding Member Rudolf Jaenisch and colleagues have now found that a mutation causing these proteins to misfold and become sticky can also turn the brain’s immune cells from friends to foes, possibly accelerating the progression of the disease.

Whitehead Institute Member David Page and colleagues measured the effects of the sex chromosomes on two types of immune cells, gaining insights into the cell-type-specific effects of gene regulation by sex chromosome genes. Their work also explores the biological underpinnings of sex biases in immunity and autoimmune disease.